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Habitat variability does not generally promote metabolic network modularity in flies and mammals

机译:栖息地变异性通常不会促进代谢网络   苍蝇和哺乳动物的模块化

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摘要

The evolution of species habitat range is an important topic over a widerange of research fields. In higher organisms, habitat range evolution isgenerally associated with genetic events such as gene duplication. However, thespecific factors that determine habitat variability remain unclear at higherlevels of biological organization (e.g., biochemical networks). One widelyaccepted hypothesis developed from both theoretical and empirical analyses isthat habitat variability promotes network modularity; however, thisrelationship has not yet been directly tested in higher organisms. Therefore, Iinvestigated the relationship between habitat variability and metabolic networkmodularity using compound and enzymatic networks in flies and mammals. Contraryto expectation, there was no clear positive correlation between habitatvariability and network modularity. As an exception, the network modularityincreased with habitat variability in the enzymatic networks of flies. However,the observed association was likely an artifact, and the frequency of geneduplication appears to be the main factor contributing to network modularity.These findings raise the question of whether or not there is a generalmechanism for habitat range expansion at a higher level (i.e., above the genescale). This study suggests that the currently widely accepted hypothesis forhabitat variability should be reconsidered.
机译:物种栖息地范围的演变是广泛研究领域中的重要课题。在高等生物中,栖息地范围的演变通常与遗传事件(例如基因复制)有关。但是,决定生境变异性的具体因素在更高级别的生物组织(例如生化网络)中仍然不清楚。从理论和实证分析中得出的一种广为接受的假设是,栖息地的可变性促进了网络的模块化。但是,这种关系尚未在高等生物中得到直接检验。因此,我使用果蝇和哺乳动物的复合网络和酶网络研究了栖息地变异性和代谢网络模块化之间的关系。与预期相反,生境变异性和网络模块性之间没有明显的正相关。作为例外,果蝇的酶网络中的网络模块性随栖息地的变化而增加。然而,观察到的关联可能是一个人工产物,并且基因复制的频率似乎是造成网络模块化的主要因素。这些发现提出了一个问题,即是否存在一种更高层次的栖息地范围扩展的通用机制(即高于基因规模)。这项研究表明,应该重新考虑目前广泛接受的关于栖息地变异性的假设。

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    Takemoto, Kazuhiro;

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  • 年度 2015
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  • 入库时间 2022-08-20 21:10:10

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